dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00603
Location and strand information: 185979 - 187658 (-)
Family: 8.A.46.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00604
Location and strand information: 187679 - 190711 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00605
Location and strand information: 190741 - 193176 (-)
Family: GH127
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8474
Protein molecular weight: 91442.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00606
Location and strand information: 193266 - 193385 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00607
Location and strand information: 193601 - 197587 (+)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00608
Location and strand information: 197700 - 200258 (-)
Family: GH3
Protein type: CAZyme
Protein description: Xylan 1,4-beta-xylosidase
Protein isoelectric point: 6.4047
Protein molecular weight: 94686.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00609
Location and strand information: 200795 - 204052 (+)
Family: GH8|GH67
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7864
Protein molecular weight: 123992.05
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00610
Location and strand information: 204177 - 206426 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.7256
Protein molecular weight: 85316.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00611
Location and strand information: 206431 - 207249 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00612
Location and strand information: 207281 - 209605 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.5064
Protein molecular weight: 87392.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00613
Location and strand information: 209695 - 211065 (-)
Family: null
Protein type: null
Protein description: SusD-like protein

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00614
Location and strand information: 211085 - 214204 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00615
Location and strand information: 214776 - 218747 (-)
Family: HTH_AraC
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00616
Location and strand information: 219122 - 219700 (-)
Family: null
Protein type: null
Protein description: Rubrerythrin

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00617
Location and strand information: 219959 - 221641 (+)
Family: 2.A.53.3.9
Protein type: TC
Protein description: C4-dicarboxylic acid transporter DauA

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00618
Location and strand information: 221683 - 223008 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002560_2|CGC6
Gene ID: MGYG000002560_00619
Location and strand information: 223112 - 225283 (-)
Family: 3.A.1.112.9
Protein type: TC
Protein description: Lactococcin-G-processing and transport ATP-binding protein LagD

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002560_00605	GH127_e10
MGYG000002560_00608	GH3_e159\|3.2.1.55\|3.2.1.37\|3.2.1.21\|3.2.1.-	xylan\|beta-glucan\|arabinan
MGYG000002560_00609	GH8_e33\|3.2.1.156	xylan
MGYG000002560_00610	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan
MGYG000002560_00612	GH92_e34\|3.2.1.24\|3.2.1.-	hostglycan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is xylan|host glycan

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002560_00603	hypothetical protein	TC	185979	187658	-	8.A.46.1.1
MGYG000002560_00604	TonB-dependent receptor SusC	TC	187679	190711	-	1.B.14.6.1
MGYG000002560_00605	hypothetical protein	CAZyme	190741	193176	-	GH127
MGYG000002560_00606	hypothetical protein	null	193266	193385	-	No domain
MGYG000002560_00607	Sensor histidine kinase RcsC	TF	193601	197587	+	HTH_AraC
MGYG000002560_00608	Xylan 1,4-beta-xylosidase	CAZyme	197700	200258	-	GH3
MGYG000002560_00609	hypothetical protein	CAZyme	200795	204052	+	GH8\| GH67
MGYG000002560_00610	hypothetical protein	CAZyme	204177	206426	-	GH92
MGYG000002560_00611	hypothetical protein	null	206431	207249	-	BSP
MGYG000002560_00612	hypothetical protein	CAZyme	207281	209605	-	GH92
MGYG000002560_00613	SusD-like protein	null	209695	211065	-	SusD-like_3\| SusD_RagB
MGYG000002560_00614	TonB-dependent receptor SusC	TC	211085	214204	-	1.B.14.6.1
MGYG000002560_00615	hypothetical protein	TF	214776	218747	-	HTH_AraC
MGYG000002560_00616	Rubrerythrin	null	219122	219700	-	Rubrerythrin
MGYG000002560_00617	C4-dicarboxylic acid transporter DauA	TC	219959	221641	+	2.A.53.3.9
MGYG000002560_00618	hypothetical protein	null	221683	223008	-	OEP\| OEP
MGYG000002560_00619	Lactococcin-G-processing and transport ATP-binding protein LagD	TC	223112	225283	-	3.A.1.112.9
Protein ID	Protein Name	Type	Start	End	Strand	Signature